Protein ZmC3H21
ZmC3H21 is a protein in the C3H family.
Information
TF Name: ZmC3H21
Species: Maize
TF Family: C3H
Gene Name(Synonym): C3H21
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmC3H21

ZmC3H21 is a protein in the C3H family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d044074DAPseq no logo sequence fimo position
Zm00001d044074DAPseq no logo sequence fimo position
Zm00001d044074ChIPseq no logo sequence fimo position
Zm00001d044074PChIPseq no logo sequence fimo position

Interactions where ZmC3H21 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmC3H21 is the target  
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There are 95 protein-dna interactions that fit this criteria. download excel sheet

Zm00001d044074_T001 from maize genome v4

Amino Acid Sequence
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MQEALVSPANAGRLRSALELKPFAFGDQRLASPRYLNLASVAGGGGGDDALFRCSSPFSPSFGFSSPSPLATSSTISLSP
SSSSSLVGDCDCDDDADADAATGHRLQLARLALQYQEVADRYELCLARLADAADEAAALRRENAELRVANGDLTRRLALL
SGIGKQAAAAAIADEVRRLRFGEQKAAKERAPEKPAVLPKSISVRSNDYLKMNQPQQVQAPATPAEDNRKPRASNPTTNR
SSVSSPSSRSRLANLTPRSLASDIVACTLLMRCMDQQRVYKGNGGDKRSEEPKEHRTAGGVELEVYNQGMLKTELCNKWE
ETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLPRP

MQEALVSPANAGRLRSALELKPFAFGDQRLASPRYLNLASVAGGGGGDDALFRCSSPFSPSFGFSSPSPLATSSTISLSP
SSSSSLVGDCDCDDDADADAATGHRLQLARLALQYQEVADRYELCLARLADAADEAAALRRENAELRVANGDLTRRLALL
SGIGKQAAAAAIADEVRRLRFGEQKAAKERAPEKPAVLPKSISVRSNDYLKMNQPQQVQAPATPAEDNRKPRASNPTTNR
SSVSSPSSRSRLANLTPRSLASDIVACTLLMRCMDQQRVYKGNGGDKRSEEPKEHRTAGGVELEVYNQGMLKTELCNKWE
ETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGEVCPYGHRCHFRHTLTPAERLHLPRP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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ATGCAGGAAGCTCTCGTATCTCCGG...

GRMZM2G157927_T01 from maize genome v3


Related TFome: pUT3992

Amino Acid Sequence
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MQEALVSPANAGRLRSALELKPFAFGDQRLASPRYLNLASVAGGGGGDDALFRCSSPFSPSFGFSSPSPLATSSTISLSP
SSSSSLVGDCDCDDDADADAATGHRLQLARLALQYQEVADRYELCLARLADAADEAAALRRENAELRVANGDLTRRLALL
SGIGKQAAAAAIADEVRRLRFGEQKAAKERAPEKPAVLPKSISVRSNDYLKMNQPQQVQAPATPAEDNRKPRASNPTTNR
SSRVYKGNGGDKRSEEPKEHRTAGGVELEVYNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVCR
MVLAGEVCPYGHRCHFRHTLTPAERLHLPRP

Nucleotide Sequence
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CAACTCCCTCCACAATCCTCGATCG...

GRMZM2G157927_T02 from maize genome v3

Amino Acid Sequence
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MQEALVSPANAGRLRSALELKPFAFGDQRLASPRYLNLASVAGGGGGDDALFRCSSPFSPSFGFSSPSPLATSSTISLSP
SSSSSLVGDCDCDDDADADAATGHRLQLARLALQYQEVADRYELCLARLADAADEAAALRRENAELRVANGDLTRRLALL
SGIGKQAAAAAIADEVRRLRFGEQKAAKERAPEKPAVLPKSISVRSNDYLKMNQPQQVQAPATPAEDNRKPRASNPTTNR
SSQRVYKGNGGDKRSEEPKEHRTAGGVELEVYNQGMLKTELCNKWEETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVC
RMVLAGEVCPYGHRCHFRHTLTPAERLHLPRP

Nucleotide Sequence
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CAACTCCCTCCACAATCCTCGATCG...

Zm00001eb158610_T001 from maize genome v5

Amino Acid Sequence
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MSMCFLNSQRPSSRVLLVSALEASLDHAGSSRISGQCRPPSLGLGAQAVRLRGPAPRLAALPQPRLRRRRRRRRRRAVPL
LLAVQPQLRLLLAVAARHLLHHLALTVLLLLPRRRLRLRRRRRRRRRHGPQAPARPPRAAVPGGGRPLRALPRPPRRRRG
RGGGAPPRERRAPRRQRRPHAPPRAPQRHWQAGRRRRDRRRGPPAALRGAEGRQGARSREACRAAQEHFRPLQRLPQDEP
AATGTGPRHAGRRQPQASRVEPDHQPKLAARVQGQWRRQEKRGTQGASHGGRRGAGGVQPGHVKDGAVQQVGGDGGVPLR
RPVPVRSRRRRAPPCHPPSALQDPGLPHGPRRRGLPLRPPLPLPPYAHPRRTPPPAPPLTKPGTRQGTAKGSLPQRWNRW
FLFHLKSSQVCVSHENV

Nucleotide Sequence
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AAAAAAACAAGCAGAACTCACAGGC...

Zm00001eb158610_T002 from maize genome v5

Amino Acid Sequence
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MLPSYYILGTKPRVRSQQHSTPSTILDRRLQRTLCFRLFVHERPSSRVLLVSALEASLDHAGSSRISGQCRPPSLGLGAQ
AVRLRGPAPRLAALPQPRLRRRRRRRRRRAVPLLLAVQPQLRLLLAVAARHLLHHLALTVLLLLPRRRLRLRRRRRRRRR
HGPQAPARPPRAAVPGGGRPLRALPRPPRRRRGRGGGAPPRERRAPRRQRRPHAPPRAPQRHWQAGRRRRDRRRGPPAAL
RGAEGRQGARSREACRAAQEHFRPLQRLPQDEPAATGTGPRHAGRRQPQASRVEPDHQPKLGELPQFTITPRQPHTPLVG
IRHCCMHLADAMHGSAARVQGQWRRQEKRGTQGASHGGRRGAGGVQPGHVKDGAVQQVGGDGGVPLRRPVPVRSRRRRAP
PCHPPSALQDPGLPHGPRRRGLPLRPPLPLPPYAHPRRTPPPAPPLTKPGTRQGTAKGSLPQRWNRWFLFHLKSSQVCVS
HENV

Nucleotide Sequence
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AAAAAAACAAGCAGAACTCACAGGC...

Zm00001eb158610_T003 from maize genome v5

Amino Acid Sequence
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MLPSYYILGTKPRVRSQQHSTPSTILDRRLQRTLCFRLFVHERPSSRVLLVSALEASLDHAGSSRISGQCRPPSLGLGAQ
AVRLRGPAPRLAALPQPRLRRRRRRRRRRAVPLLLAVQPQLRLLLAVAARHLLHHLALTVLLLLPRRRLRLRRRRRRRRR
HGPQAPARPPRAAVPGGGRPLRALPRPPRRRRGRGGGAPPRERRAPRRQRRPHAPPRAPQRHWQAGRRRRDRRRGPPAAL
RGAEGRQGARSREACRAAQEHFRPLQRLPQDEPAATGTGPRHAGRRQPQASRVEPDHQPKLARVQGQWRRQEKRGTQGAS
HGGRRGAGGVQPGHVKDGAVQQVGGDGGVPLRRPVPVRSRRRRAPPCHPPSALQDPGLPHGPRRRGLPLRPPLPLPPYAH
PRRTPPPAPPLTKPGTRQGTAKGSLPQRWNRWFLFHLKSSQVCVSHENV

Nucleotide Sequence
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AAAAAAACAAGCAGAACTCACAGGC...

Zm00001eb158610_T004 from maize genome v5

Amino Acid Sequence
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MQEALVSPANAGRLRSALELKPFAFGDQRLASPRYLNLASVAARHLLHHLALTVLLLLPRRRLRLRRRRRRRRRHGPQAP
ARPPRAAVPGGGRPLRALPRPPRRRRGRGGGAPPRERRAPRRQRRPHAPPRAPQRHWQAGRRRRDRRRGPPAALRGAEGR
QGARSREACRAAQEHFRPLQRLPQDEPAATGTGPRHAGRRQPQASRVEPDHQPKLAARVQGQWRRQEKRGTQGASHGGRR
GAGGVQPGHVKDGAVQQVGGDGGVPLRRPVPVRSRRRRAPPCHPPSALQDPGLPHGPRRRGLPLRPPLPLPPYAHPRRTP
PPAPPLTKPGTRQGTAKGSLPQRWNRWFLFHLKSSQVCVSHENV

Nucleotide Sequence
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AGCAGCACTCAACTCCCTCCACAAT...

Zm00001eb158610_T005 from maize genome v5

Amino Acid Sequence
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MQEALVSPANAGRLRSALELKPFAFGDQRLASPRYLNLASVAARHLLHHLALTVLLLLPRRRLRLRRRRRRRRRHGPQAP
ARPPRAAVPGGGRPLRALPRPPRRRRGRGGGAPPRERRAPRRQRRPHAPPRAPQRHWQAGRRRRDRRRGPPAALRGAEGR
QGARSREACRAAQEHFRPLQRLPQDEPAATGTGPRHAGRRQPQASRVEPDHQPKLGELPQFTITPRQPHTPLVGIRHCCM
HLADAMHGSAARVQGQWRRQEKRGTQGASHGGRRGAGGVQPGHVKDGAVQQVGGDGGVPLRRPVPVRSRRRRAPPCHPPS
ALQDPGLPHGPRRRGLPLRPPLPLPPYAHPRRTPPPAPPLTKPGTRQGTAKGSLPQRWNRWFLFHLKSSQVCVSHENV

Nucleotide Sequence
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CCCTCCACAATCCTCGATCGTCGTC...


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